C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution | Nature Communications
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants | bioRxiv
A promoter-level mammalian expression atlas | Nature
CAGEr: an R package for CAGE (Cap Analysis of Gene Expression) data analysis and promoterome mining
CAGEr: an R package for CAGE (Cap Analysis of Gene Expression) data analysis and promoterome mining
Frontiers | Characterizing Promoter and Enhancer Sequences by a Deep Learning Method
Comparison between annotated TSS and CAGE. (a) Distance between... | Download Scientific Diagram
Transcriptionally active enhancers in human cancer cells | Molecular Systems Biology
FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions | Genome Biology | Full Text
Distal CpG islands can serve as alternative promoters to transcribe genes with silenced proximal promoters
Epigenomes | Free Full-Text | Promoter-Adjacent DNA Hypermethylation Can Downmodulate Gene Expression: TBX15 in the Muscle Lineage
Cap analysis of gene expression (CAGE) sequencing reveals alternative promoter usage in complex disease | bioRxiv
Regional differences in gene expression and promoter usage in aged human brains - ScienceDirect
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for analysis of CAGE data | bioRxiv
Systematic analysis of transcription start sites in avian development | PLOS Biology
Differential TSS usage. (a) Schematics of differential TSS usage... | Download Scientific Diagram
Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal Promoters | PLOS Computational Biology
Promoter width. (a) Schematic representation of promoter width... | Download Scientific Diagram
Homer Software and Data Download
Characterization of Arabidopsis thaliana promoter bidirectionality and antisense RNAs by depletion of nuclear RNA decay enzymes | bioRxiv
Analysis of Enhancer–Promoter Interactions using CAGE and RADICL-Seq Technologies | SpringerLink
Linking FANTOM5 CAGE peaks to annotations with CAGEscan | Scientific Data
CAGE-seq characterization of alternative promoter usage and full-length... | Download Scientific Diagram
Cap analysis of gene expression reveals alternative promoter usage in a rat model of hypertension | Life Science Alliance
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for the analysis of CAGE data | Scientific Reports
EPD The Eukaryotic Promoter Database
CAGE - A highly sensitive and precise means of gene expression analysis.
